Sidequests is a mini game feature of Pokémon Vortex which includes of player vs Trainer battles (computer controlled). Sidequest battles are available for all the regions shown in the anime, and each region has a specific number of battles. While some regions have 50 battles, Hoenn Region boasts of over 200 battles. If you are thinking Sidequests is a waste of your time, think again before drawing that conclusion, because each region in the sidequest comes with it's own set of rewards, most of them being Fossil Pokémon, which cannot be caught on the maps. Other rewards include some Mega Stones which cannot be bought in the Pokémart, and the Orbs needed for Primal Evolution of Groudon and Kyogre.
At present, 1212 Sidequest battles are playable, however, the total number counts to 1913, which will be added in the near future.
Number of Battles
| Location | No. of Battles |
| Kanto | 101 |
| Johto | 103 |
| Sevii Islands | 100 |
| TCG Islands | 54 |
| Orange Islands | 120 |
| Hoenn | 212 |
| Almia | 146 |
| Orre | 143 |
| Sinnoh | 225 |
| Unova | ??? |
| Fiore | ??? |
| Holon | ??? |
| Kalos | ??? |
Prizes and Drop Rates
Kanto
| Kanto Sidequests | ||
| Prize | Location | Drop Rate |
 Helix Fossil |
Kanto Sidequests | 33.3% |
 Dome Fossil |
Kanto Sidequests | 33.3% |
 Old Amber |
Kanto Sidequests | 33.3% |
Johto
| Johto Sidequests | ||
| Prize | Location | Drop Rate |
 Latiosite |
Johto Sidequests | 33.3% |
 Latiasite |
Johto Sidequests | 33.3% |
 10x Master Ball(s) |
Johto Sidequests | 33.3% |
Sevii Islands
| Sevii Island Sidequests | ||
| Prize | Location | Drop Rate |
| 10x Master Ball(s) |
Sevii Islands Sidequests | 33.3% |
| 20x Master Ball(s) |
Sevii Islands Sidequests | 33.3% |
| 30x Master Ball (s) |
Sevii Islands Sidequests | 33.3% |
TCG Islands
| TCG Islands Sidequests | ||
| Prize | Location | Drop Rate |
| Master Ball (10 No.s) |
TCG Islands Sidequests | 33.3% |
| Master Ball (20 No.s) |
TCG Islands Sidequests | 33.3% |
| Master Ball (30 No.s) |
TCG Islands Sidequests | 33.3% |
Orange Islands
| Orange Islands Sidequests | ||
| Prize | Location | Drop Rate |
| Master Ball (10 No.s) |
Orange Islands Sidequests | 33.3% |
| Master Ball (20 No.s) |
Orange Islands Sidequests | 33.3% |
| Master Ball (30 No.s) |
Orange Islands Sidequests | 33.3% |
Hoenn
| Hoenn Sidequests | ||
| Prize | Location | Drop Rate |
 Claw Fossil |
Hoenn Sidequests | 25% |
 Root Fossil |
Hoenn Sidequests | 25% |
 Red Orb |
Hoenn Sidequests | 25% |
 Blue Orb |
Hoenn Sidequests | 25% |
Almia
| Almia Sidequests | ||
| Prize | Location | Drop Rate |
| Master Ball (10 No.s) |
Almia Sidequests | 33.3% |
| Master Ball (20 No.s) |
Almia Sidequests | 33.3% |
| Master Ball (30 No.s) |
Almia Sidequests | 33.3% |
Orre
| Orre Sidequests | ||
| Prize | Location | Drop Rate |
| Master Ball (10 No.s) |
Orre Sidequests | 33.3% |
| Master Ball (20 No.s) |
Orre Sidequests | 33.3% |
| Master Ball (30 No.s) |
Orre Sidequests | 33.3% |
Sinnoh
| Sinnoh Sidequests | ||
| Prize | Location | Drop Rate |
 Skull Fossil |
Sinnoh Sidequests | 50% |
 Armor Fossil |
Sinnoh Sidequests | 50% |